Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 DUTP2-201ENST00000519164 463 ntBASIC10.42□□□□□ -0.74
LIMD2Q9BT23 DUT-205ENST00000558813 769 ntTSL 2 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 LINC01023-201ENST00000606054 436 ntBASIC10.42□□□□□ -0.74
LIMD2Q9BT23 AL157888.1-201ENST00000631930 593 ntBASIC10.42□□□□□ -0.74
LIMD2Q9BT23 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 AC092850.2-201ENST00000623821 2697 ntBASIC10.42□□□□□ -0.74
LIMD2Q9BT23 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 KRT18P55-202ENST00000578578 1546 ntBASIC10.42□□□□□ -0.74
LIMD2Q9BT23 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LIMD2Q9BT23 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 RASA4DP-201ENST00000460726 1199 ntBASIC10.41□□□□□ -0.74
LIMD2Q9BT23 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 CD81-212ENST00000526072 1172 ntTSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 AL136038.4-201ENST00000603606 1261 ntBASIC10.41□□□□□ -0.74
LIMD2Q9BT23 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms