Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CPNE1Q99829 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CPNE1Q99829 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CPNE1Q99829 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE1Q99829 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.42■□□□□ 0.38
CPNE1Q99829 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE1Q99829 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE1Q99829 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CPNE1Q99829 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 AC092053.1-201ENST00000605787 1936 ntBASIC17.41■□□□□ 0.38
CPNE1Q99829 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CPNE1Q99829 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CPNE1Q99829 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CPNE1Q99829 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CPNE1Q99829 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 TSPY22P-201ENST00000427496 604 ntBASIC17.41■□□□□ 0.38
CPNE1Q99829 AC104076.2-201ENST00000448912 469 ntBASIC17.41■□□□□ 0.38
CPNE1Q99829 AC111152.3-201ENST00000569699 673 ntBASIC17.41■□□□□ 0.38
CPNE1Q99829 AL138831.2-201ENST00000606564 490 ntBASIC17.41■□□□□ 0.38
CPNE1Q99829 AL592071.1-201ENST00000611956 408 ntBASIC17.41■□□□□ 0.38
CPNE1Q99829 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE1Q99829 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE1Q99829 AL049757.1-201ENST00000616842 1596 ntBASIC17.4■□□□□ 0.38
CPNE1Q99829 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CPNE1Q99829 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE1Q99829 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE1Q99829 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE1Q99829 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CPNE1Q99829 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 AC211429.1-201ENST00000415277 523 ntBASIC17.4■□□□□ 0.38
CPNE1Q99829 AL671277.2-201ENST00000458060 996 ntBASIC17.4■□□□□ 0.38
CPNE1Q99829 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.4■□□□□ 0.38
CPNE1Q99829 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE1Q99829 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE1Q99829 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE1Q99829 AC124864.1-201ENST00000623408 392 ntBASIC17.4■□□□□ 0.38
CPNE1Q99829 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE1Q99829 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE1Q99829 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE1Q99829 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE1Q99829 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CPNE1Q99829 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
CPNE1Q99829 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE1Q99829 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE1Q99829 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CPNE1Q99829 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE1Q99829 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE1Q99829 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE1Q99829 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms