Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EYA3Q99504 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EYA3Q99504 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.02■□□□□ 0.96
EYA3Q99504 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
EYA3Q99504 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EYA3Q99504 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
EYA3Q99504 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
EYA3Q99504 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
EYA3Q99504 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
EYA3Q99504 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
EYA3Q99504 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
EYA3Q99504 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.01■□□□□ 0.95
EYA3Q99504 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.01■□□□□ 0.95
EYA3Q99504 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
EYA3Q99504 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.01■□□□□ 0.95
EYA3Q99504 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.01■□□□□ 0.95
EYA3Q99504 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.01■□□□□ 0.95
EYA3Q99504 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.01■□□□□ 0.95
EYA3Q99504 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
EYA3Q99504 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.01■□□□□ 0.95
EYA3Q99504 AL645728.2-201ENST00000641974 660 ntBASIC21.01■□□□□ 0.95
EYA3Q99504 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
EYA3Q99504 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
EYA3Q99504 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.01■□□□□ 0.95
EYA3Q99504 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EYA3Q99504 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21■□□□□ 0.95
EYA3Q99504 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
EYA3Q99504 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21■□□□□ 0.95
EYA3Q99504 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 AL035633.1-201ENST00000406139 838 ntBASIC21■□□□□ 0.95
EYA3Q99504 HLA-DRB6-201ENST00000411500 1235 ntBASIC21■□□□□ 0.95
EYA3Q99504 AL355306.1-201ENST00000415580 579 ntBASIC21■□□□□ 0.95
EYA3Q99504 AL627223.1-201ENST00000416693 442 ntBASIC21■□□□□ 0.95
EYA3Q99504 AL671277.1-201ENST00000429656 993 ntBASIC21■□□□□ 0.95
EYA3Q99504 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
EYA3Q99504 AL139327.4-201ENST00000612362 153 ntBASIC21■□□□□ 0.95
EYA3Q99504 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
EYA3Q99504 AC009093.7-201ENST00000623853 1223 ntBASIC21■□□□□ 0.95
EYA3Q99504 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21■□□□□ 0.95
EYA3Q99504 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
EYA3Q99504 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21■□□□□ 0.95
EYA3Q99504 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
EYA3Q99504 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
EYA3Q99504 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
EYA3Q99504 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.99■□□□□ 0.95
EYA3Q99504 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.99■□□□□ 0.95
EYA3Q99504 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
EYA3Q99504 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.99■□□□□ 0.95
EYA3Q99504 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EYA3Q99504 AC140658.5-201ENST00000438532 169 ntBASIC20.99■□□□□ 0.95
EYA3Q99504 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.99■□□□□ 0.95
EYA3Q99504 SPDYE11-202ENST00000450699 704 ntBASIC20.99■□□□□ 0.95
EYA3Q99504 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.99■□□□□ 0.95
EYA3Q99504 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.99■□□□□ 0.95
EYA3Q99504 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.99■□□□□ 0.95
EYA3Q99504 SPDYE9P-201ENST00000570642 692 ntBASIC20.99■□□□□ 0.95
EYA3Q99504 SPDYE10P-202ENST00000612005 668 ntBASIC20.99■□□□□ 0.95
EYA3Q99504 SPDYE8P-202ENST00000612377 668 ntBASIC20.99■□□□□ 0.95
EYA3Q99504 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.99■□□□□ 0.95
EYA3Q99504 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
EYA3Q99504 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.99■□□□□ 0.95
EYA3Q99504 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EYA3Q99504 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms