Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALPK3Q96L96 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
ALPK3Q96L96 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 AC084346.2-201ENST00000607097 949 ntBASIC18.72■□□□□ 0.59
ALPK3Q96L96 TEX28P1-201ENST00000613479 1221 ntBASIC18.72■□□□□ 0.59
ALPK3Q96L96 AC007967.4-201ENST00000614700 386 ntBASIC18.72■□□□□ 0.59
ALPK3Q96L96 TEX28P2-201ENST00000617764 1221 ntBASIC18.72■□□□□ 0.59
ALPK3Q96L96 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 FOXO1B-201ENST00000504678 1527 ntBASIC18.72■□□□□ 0.59
ALPK3Q96L96 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 AL096828.2-201ENST00000567259 1965 ntBASIC18.72■□□□□ 0.59
ALPK3Q96L96 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.72■□□□□ 0.59
ALPK3Q96L96 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALPK3Q96L96 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ALPK3Q96L96 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.71■□□□□ 0.59
ALPK3Q96L96 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.71■□□□□ 0.59
ALPK3Q96L96 AL512384.1-201ENST00000406683 331 ntBASIC18.71■□□□□ 0.59
ALPK3Q96L96 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.71■□□□□ 0.59
ALPK3Q96L96 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.71■□□□□ 0.59
ALPK3Q96L96 AL031055.1-201ENST00000606362 631 ntBASIC18.71■□□□□ 0.59
ALPK3Q96L96 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
ALPK3Q96L96 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALPK3Q96L96 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALPK3Q96L96 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALPK3Q96L96 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALPK3Q96L96 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALPK3Q96L96 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.71■□□□□ 0.59
ALPK3Q96L96 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ALPK3Q96L96 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 BCYRN1-201ENST00000418539 200 ntBASIC18.7■□□□□ 0.58
ALPK3Q96L96 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ALPK3Q96L96 AC104794.3-201ENST00000566840 1248 ntBASIC18.7■□□□□ 0.58
ALPK3Q96L96 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALPK3Q96L96 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALPK3Q96L96 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALPK3Q96L96 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALPK3Q96L96 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALPK3Q96L96 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 KRT17P8-201ENST00000540749 863 ntBASIC18.69■□□□□ 0.58
ALPK3Q96L96 MIR3909-201ENST00000579518 119 ntBASIC18.69■□□□□ 0.58
ALPK3Q96L96 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALPK3Q96L96 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms