Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 HBZP1-201ENST00000354915 429 ntBASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 ATP5G1P1-201ENST00000448724 379 ntBASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 IGHV3-52-201ENST00000519770 353 ntBASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 AC109462.3-201ENST00000573934 613 ntBASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC44A1Q8WWI5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SLC44A1Q8WWI5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC44A1Q8WWI5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SLC44A1Q8WWI5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC44A1Q8WWI5 PCDH8P1-201ENST00000428983 2773 ntBASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 AC007967.3-201ENST00000434308 558 ntBASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 YBX1P2-201ENST00000489612 999 ntBASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 AC133561.5-201ENST00000635547 218 ntBASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 PKD1P1-201ENST00000458669 6805 ntBASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC44A1Q8WWI5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 AC139887.4-201ENST00000607877 719 ntBASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC44A1Q8WWI5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC44A1Q8WWI5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms