Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGB4Q8WW32 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 TSEN15P1-201ENST00000423257 515 ntBASIC17.4■□□□□ 0.38
HMGB4Q8WW32 ACTG1P4-201ENST00000425123 1122 ntBASIC17.4■□□□□ 0.38
HMGB4Q8WW32 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 AP000344.2-201ENST00000512987 629 ntBASIC17.4■□□□□ 0.38
HMGB4Q8WW32 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 AC093503.3-201ENST00000624917 2352 ntBASIC17.4■□□□□ 0.38
HMGB4Q8WW32 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 AL590787.1-201ENST00000568856 1315 ntBASIC17.4■□□□□ 0.38
HMGB4Q8WW32 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
HMGB4Q8WW32 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.39■□□□□ 0.38
HMGB4Q8WW32 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.39■□□□□ 0.38
HMGB4Q8WW32 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
HMGB4Q8WW32 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGB4Q8WW32 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGB4Q8WW32 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGB4Q8WW32 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HMGB4Q8WW32 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 MIR3197-201ENST00000582241 73 ntBASIC17.38■□□□□ 0.37
HMGB4Q8WW32 AC068137.2-201ENST00000605408 478 ntBASIC17.38■□□□□ 0.37
HMGB4Q8WW32 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGB4Q8WW32 AC092902.6-201ENST00000641783 218 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms