Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 FLJ38576-201ENST00000623820 2459 ntBASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 AC093827.2-201ENST00000512654 315 ntBASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 AC140113.3-201ENST00000605663 199 ntBASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DNAAF1Q8NEP3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 AC087499.1-201ENST00000418141 1075 ntBASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 SLC25A3P1-201ENST00000443844 931 ntBASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 RASA4DP-201ENST00000460726 1199 ntBASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DNAAF1Q8NEP3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 LIN28AP1-201ENST00000429574 405 ntBASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.34■□□□□ 0.05
DNAAF1Q8NEP3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms