Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 HCG4-201ENST00000418983 998 ntBASIC23.84■■□□□ 1.41
XRN1Q8IZH2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 AL662799.1-202ENST00000614205 422 ntBASIC23.84■■□□□ 1.41
XRN1Q8IZH2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 AL358472.5-202ENST00000641448 1267 ntBASIC23.84■■□□□ 1.41
XRN1Q8IZH2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 AL353732.1-201ENST00000569618 1459 ntBASIC23.84■■□□□ 1.41
XRN1Q8IZH2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 AC027307.2-201ENST00000591252 911 ntBASIC23.84■■□□□ 1.41
XRN1Q8IZH2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.84■■□□□ 1.41
XRN1Q8IZH2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRN1Q8IZH2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRN1Q8IZH2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.83■■□□□ 1.41
XRN1Q8IZH2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRN1Q8IZH2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRN1Q8IZH2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRN1Q8IZH2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRN1Q8IZH2 SPTLC1P1-201ENST00000447199 261 ntBASIC23.83■■□□□ 1.41
XRN1Q8IZH2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
XRN1Q8IZH2 FOXO1B-201ENST00000504678 1527 ntBASIC23.83■■□□□ 1.41
XRN1Q8IZH2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC23.83■■□□□ 1.4
XRN1Q8IZH2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
XRN1Q8IZH2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
XRN1Q8IZH2 AC016027.1-202ENST00000607927 1699 ntBASIC23.83■■□□□ 1.4
XRN1Q8IZH2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
XRN1Q8IZH2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
XRN1Q8IZH2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 MIR346-201ENST00000362234 95 ntBASIC23.82■■□□□ 1.4
XRN1Q8IZH2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 AC010336.2-201ENST00000564226 506 ntBASIC23.82■■□□□ 1.4
XRN1Q8IZH2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
XRN1Q8IZH2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 U91328.1-201ENST00000437528 223 ntBASIC23.81■■□□□ 1.4
XRN1Q8IZH2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 AL590560.3-201ENST00000623350 461 ntBASIC23.81■■□□□ 1.4
XRN1Q8IZH2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 AC009477.1-201ENST00000452936 217 ntBASIC23.81■■□□□ 1.4
XRN1Q8IZH2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC23.81■■□□□ 1.4
XRN1Q8IZH2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms