Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SIGLEC30P-201ENST00000455569 941 ntBASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 AL121912.1-201ENST00000603683 238 ntBASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 AL135999.2-201ENST00000622438 1686 ntBASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 AC108860.2-201ENST00000562760 2183 ntBASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCUBE3Q8IX30 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 PRYP5-201ENST00000451909 266 ntBASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 SCARNA2-201ENST00000458748 420 ntBASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 AL031008.1-201ENST00000619963 541 ntBASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 AL139288.1-201ENST00000623748 933 ntBASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCUBE3Q8IX30 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 NIFKP4-201ENST00000567275 1192 ntBASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms