Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 SPCS2P4-201ENST00000436160 681 ntBASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AL033527.4-201ENST00000641026 673 ntBASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC079776.1-201ENST00000401540 1152 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC245100.3-201ENST00000441281 285 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SPTLC1P1-201ENST00000447199 261 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC097493.3-201ENST00000509725 367 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC243562.1-201ENST00000560672 389 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC107890.1-201ENST00000422478 521 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 ACA64.2-201ENST00000459014 129 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SLC25A39P2-201ENST00000537614 270 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC007064.4-201ENST00000637740 555 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AL355306.1-201ENST00000415580 579 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SPDYE14P-201ENST00000442619 822 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 STK19B-204ENST00000512515 211 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 BAD-207ENST00000544785 525 ntTSL 3 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC084121.4-201ENST00000641598 221 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AF228730.8-201ENST00000642140 221 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 LINC00304-203ENST00000565008 1864 ntBASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VPS13BQ7Z7G8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AC092580.3-201ENST00000430932 139 ntBASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AL359881.2-201ENST00000602973 570 ntBASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 IGHV3-72-202ENST00000621503 303 ntBASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms