Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LYSMD3Q7Z3D4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AC148477.5-201ENST00000625164 1645 ntBASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AC009336.1-201ENST00000608941 1553 ntBASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AC084018.2-201ENST00000613093 2607 ntBASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 SPDYE21P-201ENST00000413323 827 ntBASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 FGFR3P6-201ENST00000457012 610 ntBASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD3Q7Z3D4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 AC046185.3-201ENST00000623228 1824 ntBASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 AC079776.2-201ENST00000641154 1609 ntBASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD3Q7Z3D4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 AC004817.3-201ENST00000602957 2129 ntBASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms