Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
FOXR1Q6PIV2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
FOXR1Q6PIV2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 AC105917.1-201ENST00000506637 2539 ntBASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXR1Q6PIV2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 AL357033.4-201ENST00000617703 1807 ntBASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 STARP1-201ENST00000397973 869 ntBASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 SPDYE15P-201ENST00000424157 909 ntBASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 DBET-201ENST00000630918 3363 ntBASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXR1Q6PIV2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms