Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 HYMAI-201ENST00000635591 3347 ntBASIC15.25■□□□□ 0.03
C11orf88Q6PI97 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.25■□□□□ 0.03
C11orf88Q6PI97 CROCCP2-202ENST00000412962 2773 ntBASIC15.24■□□□□ 0.03
C11orf88Q6PI97 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 TSPY17P-201ENST00000450329 467 ntBASIC15.24■□□□□ 0.03
C11orf88Q6PI97 CA15P1-201ENST00000481698 905 ntBASIC15.24■□□□□ 0.03
C11orf88Q6PI97 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 PCDHA14-201ENST00000506751 2298 ntBASIC15.24■□□□□ 0.03
C11orf88Q6PI97 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.24■□□□□ 0.03
C11orf88Q6PI97 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 MFAP1P1-201ENST00000442257 1255 ntBASIC15.23■□□□□ 0.03
C11orf88Q6PI97 KRT18P57-201ENST00000443599 1254 ntBASIC15.23■□□□□ 0.03
C11orf88Q6PI97 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms