Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 KRT18P67-201ENST00000432816 1264 ntBASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 SCARNA2-201ENST00000458748 420 ntBASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 BX005266.1-201ENST00000473402 457 ntBASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 RNPS1P1-201ENST00000507437 918 ntBASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 NKAPP1-205ENST00000585790 367 ntBASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 AC073592.5-201ENST00000624854 528 ntBASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 HLA-A-201ENST00000376802 1334 ntBASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 AF186996.4-201ENST00000467186 377 ntBASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 AL662844.1-201ENST00000546340 181 ntBASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 AC021087.4-201ENST00000563761 564 ntBASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 AL773604.1-201ENST00000617417 272 ntBASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD3Q6PCD5 REXO1L11P-201ENST00000620964 1927 ntBASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 AC132938.5-201ENST00000624980 1813 ntBASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 HNRNPDP1-201ENST00000439535 754 ntBASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 AC018712.1-201ENST00000455767 687 ntBASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 AC073648.2-201ENST00000510116 352 ntBASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms