Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRPF38BQ5VTL8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PRPF38BQ5VTL8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PRPF38BQ5VTL8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF38BQ5VTL8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PRPF38BQ5VTL8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.7■□□□□ 0.58
PRPF38BQ5VTL8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF38BQ5VTL8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF38BQ5VTL8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 KRT43P-201ENST00000434019 910 ntBASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 AC018529.1-201ENST00000613063 361 ntBASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 AL021578.1-201ENST00000613646 709 ntBASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 AC007967.4-201ENST00000614700 386 ntBASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
PRPF38BQ5VTL8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 RNA5SP412-201ENST00000516234 123 ntBASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 AC020907.5-201ENST00000624372 1936 ntBASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRPF38BQ5VTL8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 HINT2P1-201ENST00000419438 481 ntBASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 STK19B-204ENST00000512515 211 ntBASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRPF38BQ5VTL8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms