Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 HMGA1P5-201ENST00000412453 271 ntBASIC16.83■□□□□ 0.28
RNF220Q5VTB9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 AC010240.3-201ENST00000607688 395 ntBASIC16.83■□□□□ 0.28
RNF220Q5VTB9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 NEK4P2-201ENST00000580004 1012 ntBASIC16.82■□□□□ 0.28
RNF220Q5VTB9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF220Q5VTB9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 AC093010.1-201ENST00000473625 1624 ntBASIC16.81■□□□□ 0.28
RNF220Q5VTB9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 AC009947.2-201ENST00000444014 672 ntBASIC16.81■□□□□ 0.28
RNF220Q5VTB9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 SEC1P-202ENST00000473944 940 ntBASIC16.81■□□□□ 0.28
RNF220Q5VTB9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 AC144831.1-201ENST00000573312 2656 ntBASIC16.81■□□□□ 0.28
RNF220Q5VTB9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF220Q5VTB9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF220Q5VTB9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF220Q5VTB9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF220Q5VTB9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF220Q5VTB9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF220Q5VTB9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF220Q5VTB9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF220Q5VTB9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF220Q5VTB9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms