Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 CRB3P1-201ENST00000449338 276 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AL139327.4-201ENST00000612362 153 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AC016027.1-202ENST00000607927 1699 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 RBPMS2P1-201ENST00000437762 623 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 FAM86C2P-203ENST00000528684 1004 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 HILS1-202ENST00000545329 423 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AC010336.2-201ENST00000564226 506 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AL031055.1-201ENST00000606362 631 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AL645728.2-201ENST00000641974 660 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AC098818.2-201ENST00000564925 2320 ntBASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
VPS13DQ5THJ4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 AC125807.1-201ENST00000483097 614 ntBASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 FOXO1B-201ENST00000504678 1527 ntBASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 AP000974.1-201ENST00000623909 2387 ntBASIC11.55□□□□□ -0.56
VPS13DQ5THJ4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 AC142381.1-201ENST00000426099 345 ntBASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 AL138918.1-201ENST00000568306 659 ntBASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 AKAP8P1-201ENST00000434743 1349 ntBASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 AC012317.2-201ENST00000623305 2251 ntBASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13DQ5THJ4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms