Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTSL3PQ5NE16 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTSL3PQ5NE16 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 AL020989.1-201ENST00000422979 469 ntBASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 KRT18P31-201ENST00000506277 1292 ntBASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 AC012313.10-201ENST00000623509 926 ntBASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 AC073592.4-201ENST00000623827 446 ntBASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 AC079776.2-201ENST00000641154 1609 ntBASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSL3PQ5NE16 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 AC092053.1-201ENST00000605787 1936 ntBASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 AP005117.1-201ENST00000584346 1413 ntBASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 SIGLEC16-201ENST00000599858 1437 ntBASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 TSPY19P-201ENST00000418461 509 ntBASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 TSPY18P-201ENST00000441642 509 ntBASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 AC090340.1-201ENST00000620778 4980 ntBASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSL3PQ5NE16 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 AC106795.1-205ENST00000512851 1056 ntBASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 PRELID1P1-202ENST00000567272 903 ntBASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSL3PQ5NE16 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSL3PQ5NE16 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSL3PQ5NE16 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms