Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 C2orf69P3-201ENST00000565542 1120 ntBASIC15.62■□□□□ 0.09
CCDC58Q4VC31 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC58Q4VC31 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 RBM17P1-201ENST00000453646 1190 ntBASIC15.61■□□□□ 0.09
CCDC58Q4VC31 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 AL512604.3-201ENST00000569583 964 ntBASIC15.61■□□□□ 0.09
CCDC58Q4VC31 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 AC024243.1-201ENST00000609234 778 ntBASIC15.61■□□□□ 0.09
CCDC58Q4VC31 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC58Q4VC31 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 AC106886.4-201ENST00000623557 2502 ntBASIC15.6■□□□□ 0.09
CCDC58Q4VC31 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 AC005104.2-201ENST00000427818 678 ntBASIC15.6■□□□□ 0.09
CCDC58Q4VC31 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 NEK4P2-201ENST00000580004 1012 ntBASIC15.6■□□□□ 0.09
CCDC58Q4VC31 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC58Q4VC31 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms