Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 KRT18P27-201ENST00000427733 1299 ntBASIC20.29■□□□□ 0.84
CCDC96Q2M329 PMS2P1-201ENST00000431037 1228 ntBASIC20.29■□□□□ 0.84
CCDC96Q2M329 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC96Q2M329 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC96Q2M329 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC96Q2M329 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC96Q2M329 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC96Q2M329 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCDC96Q2M329 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC96Q2M329 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC96Q2M329 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
CCDC96Q2M329 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC96Q2M329 AC136632.2-201ENST00000512891 861 ntBASIC20.28■□□□□ 0.84
CCDC96Q2M329 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC96Q2M329 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC96Q2M329 AC004706.3-202ENST00000621574 984 ntBASIC20.28■□□□□ 0.84
CCDC96Q2M329 AC005593.1-201ENST00000624894 515 ntBASIC20.28■□□□□ 0.84
CCDC96Q2M329 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC96Q2M329 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC96Q2M329 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC96Q2M329 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC96Q2M329 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 NOC2LP2-201ENST00000407594 1944 ntBASIC20.27■□□□□ 0.84
CCDC96Q2M329 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 AC006504.4-201ENST00000592118 1568 ntBASIC20.27■□□□□ 0.84
CCDC96Q2M329 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 POLD2P1-201ENST00000511220 997 ntBASIC20.27■□□□□ 0.84
CCDC96Q2M329 KRT18P58-201ENST00000527480 1120 ntBASIC20.27■□□□□ 0.84
CCDC96Q2M329 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 Z83851.2-201ENST00000609564 659 ntBASIC20.27■□□□□ 0.84
CCDC96Q2M329 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC96Q2M329 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC96Q2M329 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC96Q2M329 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CCDC96Q2M329 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
CCDC96Q2M329 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CCDC96Q2M329 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CCDC96Q2M329 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC96Q2M329 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC96Q2M329 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
CCDC96Q2M329 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC96Q2M329 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC96Q2M329 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC96Q2M329 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCDC96Q2M329 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC96Q2M329 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC96Q2M329 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC96Q2M329 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC96Q2M329 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC96Q2M329 AC073621.1-201ENST00000392730 636 ntBASIC20.26■□□□□ 0.83
CCDC96Q2M329 UNC93B6-202ENST00000528242 690 ntBASIC20.26■□□□□ 0.83
CCDC96Q2M329 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC96Q2M329 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC96Q2M329 AC145285.3-201ENST00000564603 959 ntBASIC20.26■□□□□ 0.83
CCDC96Q2M329 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC96Q2M329 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC96Q2M329 LINC01451-201ENST00000623792 534 ntBASIC20.26■□□□□ 0.83
CCDC96Q2M329 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC96Q2M329 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms