Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SMAD3P84022 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.69■□□□□ 0.58
SMAD3P84022 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD3P84022 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 SPDYE7P-202ENST00000420373 878 ntBASIC18.69■□□□□ 0.58
SMAD3P84022 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 KRT17P7-201ENST00000451704 1104 ntBASIC18.69■□□□□ 0.58
SMAD3P84022 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 SERBP1P5-201ENST00000510079 1181 ntBASIC18.69■□□□□ 0.58
SMAD3P84022 STK19B-204ENST00000512515 211 ntBASIC18.69■□□□□ 0.58
SMAD3P84022 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.69■□□□□ 0.58
SMAD3P84022 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.69■□□□□ 0.58
SMAD3P84022 AC243562.1-201ENST00000560672 389 ntBASIC18.69■□□□□ 0.58
SMAD3P84022 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.69■□□□□ 0.58
SMAD3P84022 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SMAD3P84022 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SMAD3P84022 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.69■□□□□ 0.58
SMAD3P84022 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.69■□□□□ 0.58
SMAD3P84022 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD3P84022 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.69■□□□□ 0.58
SMAD3P84022 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.68■□□□□ 0.58
SMAD3P84022 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
SMAD3P84022 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMAD3P84022 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.68■□□□□ 0.58
SMAD3P84022 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.68■□□□□ 0.58
SMAD3P84022 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SMAD3P84022 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SMAD3P84022 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
SMAD3P84022 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.68■□□□□ 0.58
SMAD3P84022 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SMAD3P84022 AC140658.5-201ENST00000438532 169 ntBASIC18.68■□□□□ 0.58
SMAD3P84022 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.68■□□□□ 0.58
SMAD3P84022 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.68■□□□□ 0.58
SMAD3P84022 STK25P1-201ENST00000585406 838 ntBASIC18.68■□□□□ 0.58
SMAD3P84022 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SMAD3P84022 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 WIZP1-201ENST00000531444 2299 ntBASIC18.68■□□□□ 0.58
SMAD3P84022 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.68■□□□□ 0.58
SMAD3P84022 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SMAD3P84022 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.68■□□□□ 0.58
SMAD3P84022 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD3P84022 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMAD3P84022 CU639417.3-201ENST00000624240 1404 ntBASIC18.67■□□□□ 0.58
SMAD3P84022 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMAD3P84022 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMAD3P84022 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMAD3P84022 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SMAD3P84022 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD3P84022 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD3P84022 AC097493.3-201ENST00000509725 367 ntBASIC18.67■□□□□ 0.58
SMAD3P84022 AC069120.2-201ENST00000524091 540 ntBASIC18.67■□□□□ 0.58
SMAD3P84022 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.67■□□□□ 0.58
SMAD3P84022 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 AL606495.2-201ENST00000605867 535 ntBASIC18.67■□□□□ 0.58
SMAD3P84022 AC019129.2-201ENST00000609837 1235 ntBASIC18.67■□□□□ 0.58
SMAD3P84022 AC009118.2-201ENST00000613275 655 ntBASIC18.67■□□□□ 0.58
SMAD3P84022 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.67■□□□□ 0.58
SMAD3P84022 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD3P84022 AC020763.4-201ENST00000623414 4170 ntBASIC18.67■□□□□ 0.58
SMAD3P84022 AC008677.1-201ENST00000519230 1561 ntBASIC18.67■□□□□ 0.58
SMAD3P84022 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.67■□□□□ 0.58
SMAD3P84022 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD3P84022 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD3P84022 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD3P84022 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD3P84022 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.66■□□□□ 0.58
SMAD3P84022 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD3P84022 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMAD3P84022 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMAD3P84022 AC093503.3-201ENST00000624917 2352 ntBASIC18.66■□□□□ 0.58
SMAD3P84022 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMAD3P84022 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD3P84022 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD3P84022 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms