Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SRP54P61011 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
SRP54P61011 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.18■□□□□ 0.34
SRP54P61011 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SRP54P61011 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SRP54P61011 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.18■□□□□ 0.34
SRP54P61011 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 AC005104.2-201ENST00000427818 678 ntBASIC17.18■□□□□ 0.34
SRP54P61011 AC009947.1-201ENST00000444350 727 ntBASIC17.18■□□□□ 0.34
SRP54P61011 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SRP54P61011 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.18■□□□□ 0.34
SRP54P61011 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.18■□□□□ 0.34
SRP54P61011 GPALPP1-207ENST00000611650 899 ntBASIC17.18■□□□□ 0.34
SRP54P61011 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.18■□□□□ 0.34
SRP54P61011 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.18■□□□□ 0.34
SRP54P61011 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.18■□□□□ 0.34
SRP54P61011 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SRP54P61011 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SRP54P61011 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRP54P61011 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SRP54P61011 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
SRP54P61011 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.17■□□□□ 0.34
SRP54P61011 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.17■□□□□ 0.34
SRP54P61011 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.17■□□□□ 0.34
SRP54P61011 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.17■□□□□ 0.34
SRP54P61011 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.17■□□□□ 0.34
SRP54P61011 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.17■□□□□ 0.34
SRP54P61011 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.17■□□□□ 0.34
SRP54P61011 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.17■□□□□ 0.34
SRP54P61011 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.17■□□□□ 0.34
SRP54P61011 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 AC006504.4-201ENST00000592118 1568 ntBASIC17.17■□□□□ 0.34
SRP54P61011 AC006538.3-201ENST00000612495 578 ntBASIC17.17■□□□□ 0.34
SRP54P61011 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRP54P61011 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SRP54P61011 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.17■□□□□ 0.34
SRP54P61011 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.16■□□□□ 0.34
SRP54P61011 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRP54P61011 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SRP54P61011 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SRP54P61011 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRP54P61011 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.16■□□□□ 0.34
SRP54P61011 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SRP54P61011 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.16■□□□□ 0.34
SRP54P61011 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRP54P61011 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SRP54P61011 KRT18P13-201ENST00000400056 1290 ntBASIC17.16■□□□□ 0.34
SRP54P61011 ELK2BP-201ENST00000415014 1224 ntBASIC17.16■□□□□ 0.34
SRP54P61011 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.16■□□□□ 0.34
SRP54P61011 KRT18P3-201ENST00000451602 1288 ntBASIC17.16■□□□□ 0.34
SRP54P61011 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SRP54P61011 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SRP54P61011 AC097637.2-201ENST00000624096 1997 ntBASIC17.16■□□□□ 0.34
SRP54P61011 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRP54P61011 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRP54P61011 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.16■□□□□ 0.34
SRP54P61011 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRP54P61011 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms