Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC007967.3-201ENST00000434308 558 ntBASIC16■□□□□ 0.15
CLDN20P56880 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16■□□□□ 0.15
CLDN20P56880 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 AL121894.2-201ENST00000602977 491 ntBASIC16■□□□□ 0.15
CLDN20P56880 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16■□□□□ 0.15
CLDN20P56880 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN20P56880 AC009949.1-201ENST00000623048 1830 ntBASIC16■□□□□ 0.15
CLDN20P56880 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN20P56880 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN20P56880 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN20P56880 AC097374.2-201ENST00000618617 1306 ntBASIC15.99■□□□□ 0.15
CLDN20P56880 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 AL023806.1-201ENST00000603994 1649 ntBASIC15.99■□□□□ 0.15
CLDN20P56880 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN20P56880 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 AC096633.1-201ENST00000422446 749 ntBASIC15.99■□□□□ 0.15
CLDN20P56880 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN20P56880 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN20P56880 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN20P56880 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN20P56880 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN20P56880 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN20P56880 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN20P56880 RN7SL510P-201ENST00000581311 263 ntBASIC15.99■□□□□ 0.15
CLDN20P56880 AC011467.2-201ENST00000598425 242 ntBASIC15.99■□□□□ 0.15
CLDN20P56880 AL591684.3-201ENST00000605187 298 ntBASIC15.99■□□□□ 0.15
CLDN20P56880 AL691432.3-201ENST00000621860 400 ntBASIC15.99■□□□□ 0.15
CLDN20P56880 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN20P56880 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN20P56880 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN20P56880 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN20P56880 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 KRT18P55-202ENST00000578578 1546 ntBASIC15.99■□□□□ 0.15
CLDN20P56880 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN20P56880 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CLDN20P56880 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN20P56880 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CLDN20P56880 INTS4P1-201ENST00000438455 1935 ntBASIC15.98■□□□□ 0.15
CLDN20P56880 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.98■□□□□ 0.15
CLDN20P56880 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CLDN20P56880 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.98■□□□□ 0.15
CLDN20P56880 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN20P56880 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDN20P56880 LINC01711-201ENST00000598340 967 ntBASIC15.98■□□□□ 0.15
CLDN20P56880 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms