Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXG1P55316 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXG1P55316 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXG1P55316 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXG1P55316 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXG1P55316 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 AC006504.4-201ENST00000592118 1568 ntBASIC15.25■□□□□ 0.03
FOXG1P55316 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXG1P55316 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXG1P55316 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.25■□□□□ 0.03
FOXG1P55316 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 LAGE3P1-201ENST00000425356 484 ntBASIC15.25■□□□□ 0.03
FOXG1P55316 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXG1P55316 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.25■□□□□ 0.03
FOXG1P55316 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.25■□□□□ 0.03
FOXG1P55316 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 AC139887.3-201ENST00000568585 713 ntBASIC15.25■□□□□ 0.03
FOXG1P55316 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXG1P55316 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.25■□□□□ 0.03
FOXG1P55316 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 CROCCP2-202ENST00000412962 2773 ntBASIC15.25■□□□□ 0.03
FOXG1P55316 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FOXG1P55316 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
FOXG1P55316 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXG1P55316 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
FOXG1P55316 AC141586.5-201ENST00000624546 2050 ntBASIC15.24■□□□□ 0.03
FOXG1P55316 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FOXG1P55316 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
FOXG1P55316 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXG1P55316 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
FOXG1P55316 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXG1P55316 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXG1P55316 AC073621.1-201ENST00000392730 636 ntBASIC15.24■□□□□ 0.03
FOXG1P55316 ELK2BP-201ENST00000415014 1224 ntBASIC15.24■□□□□ 0.03
FOXG1P55316 AL590627.1-203ENST00000421194 1026 ntBASIC15.24■□□□□ 0.03
FOXG1P55316 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXG1P55316 SLC25A1P1-201ENST00000528351 927 ntBASIC15.24■□□□□ 0.03
FOXG1P55316 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.24■□□□□ 0.03
FOXG1P55316 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXG1P55316 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXG1P55316 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FOXG1P55316 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXG1P55316 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FOXG1P55316 AL589182.2-201ENST00000619332 1049 ntBASIC15.24■□□□□ 0.03
FOXG1P55316 AC004706.3-202ENST00000621574 984 ntBASIC15.24■□□□□ 0.03
FOXG1P55316 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.24■□□□□ 0.03
FOXG1P55316 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXG1P55316 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FOXG1P55316 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXG1P55316 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 AC139713.2-201ENST00000641328 2723 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
FOXG1P55316 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms