Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH13P55290 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH13P55290 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH13P55290 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH13P55290 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH13P55290 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH13P55290 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH13P55290 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH13P55290 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH13P55290 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH13P55290 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH13P55290 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH13P55290 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH13P55290 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH13P55290 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CDH13P55290 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CDH13P55290 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH13P55290 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CDH13P55290 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH13P55290 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH13P55290 AC092053.1-201ENST00000605787 1936 ntBASIC17.04■□□□□ 0.32
CDH13P55290 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH13P55290 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH13P55290 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH13P55290 TSPY22P-201ENST00000427496 604 ntBASIC17.04■□□□□ 0.32
CDH13P55290 RN7SL606P-201ENST00000472779 293 ntBASIC17.04■□□□□ 0.32
CDH13P55290 GUSBP12-201ENST00000513727 720 ntBASIC17.04■□□□□ 0.32
CDH13P55290 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 AC109462.3-201ENST00000573934 613 ntBASIC17.04■□□□□ 0.32
CDH13P55290 RN7SL850P-201ENST00000579959 291 ntBASIC17.04■□□□□ 0.32
CDH13P55290 AC019129.2-201ENST00000609837 1235 ntBASIC17.04■□□□□ 0.32
CDH13P55290 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH13P55290 AC124864.1-201ENST00000623408 392 ntBASIC17.04■□□□□ 0.32
CDH13P55290 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH13P55290 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH13P55290 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH13P55290 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH13P55290 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH13P55290 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH13P55290 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH13P55290 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH13P55290 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
CDH13P55290 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
CDH13P55290 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH13P55290 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH13P55290 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 AC005915.1-201ENST00000624912 2018 ntBASIC17.03■□□□□ 0.32
CDH13P55290 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH13P55290 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 SLC25A1P3-201ENST00000395415 828 ntBASIC17.03■□□□□ 0.32
CDH13P55290 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 DUX4L26-201ENST00000489078 1255 ntBASIC17.03■□□□□ 0.32
CDH13P55290 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH13P55290 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH13P55290 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH13P55290 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.03■□□□□ 0.32
CDH13P55290 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 AC093525.9-201ENST00000624961 1746 ntBASIC17.03■□□□□ 0.32
CDH13P55290 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH13P55290 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH13P55290 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH13P55290 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH13P55290 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms