Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.53
CLTCL1P53675 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLTCL1P53675 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLTCL1P53675 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CLTCL1P53675 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC24.63■■□□□ 1.53
CLTCL1P53675 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CLTCL1P53675 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 TFAMP1-201ENST00000412727 736 ntBASIC24.63■■□□□ 1.53
CLTCL1P53675 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC24.63■■□□□ 1.53
CLTCL1P53675 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLTCL1P53675 AL096865.1-201ENST00000606796 927 ntBASIC24.63■■□□□ 1.53
CLTCL1P53675 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC24.63■■□□□ 1.53
CLTCL1P53675 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC24.63■■□□□ 1.53
CLTCL1P53675 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CLTCL1P53675 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLTCL1P53675 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLTCL1P53675 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CLTCL1P53675 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
CLTCL1P53675 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC24.62■■□□□ 1.53
CLTCL1P53675 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLTCL1P53675 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLTCL1P53675 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC24.62■■□□□ 1.53
CLTCL1P53675 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
CLTCL1P53675 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC24.62■■□□□ 1.53
CLTCL1P53675 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC24.62■■□□□ 1.53
CLTCL1P53675 AC051619.7-201ENST00000568314 623 ntBASIC24.62■■□□□ 1.53
CLTCL1P53675 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CLTCL1P53675 BSG-214ENST00000614867 960 ntTSL 3 BASIC24.62■■□□□ 1.53
CLTCL1P53675 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLTCL1P53675 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC24.62■■□□□ 1.53
CLTCL1P53675 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC24.62■■□□□ 1.53
CLTCL1P53675 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLTCL1P53675 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC24.62■■□□□ 1.53
CLTCL1P53675 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLTCL1P53675 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC24.61■■□□□ 1.53
CLTCL1P53675 NMU-203ENST00000507338 658 ntTSL 3 BASIC24.61■■□□□ 1.53
CLTCL1P53675 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC24.61■■□□□ 1.53
CLTCL1P53675 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
CLTCL1P53675 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC24.61■■□□□ 1.53
CLTCL1P53675 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLTCL1P53675 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC24.61■■□□□ 1.53
CLTCL1P53675 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLTCL1P53675 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC24.61■■□□□ 1.53
CLTCL1P53675 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLTCL1P53675 AC008764.6-201ENST00000595909 2069 ntBASIC24.61■■□□□ 1.53
CLTCL1P53675 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLTCL1P53675 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLTCL1P53675 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLTCL1P53675 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLTCL1P53675 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC24.61■■□□□ 1.53
CLTCL1P53675 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC24.61■■□□□ 1.53
CLTCL1P53675 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC24.61■■□□□ 1.53
CLTCL1P53675 AP001059.3-201ENST00000619053 235 ntBASIC24.61■■□□□ 1.53
CLTCL1P53675 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC24.61■■□□□ 1.53
CLTCL1P53675 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC24.6■■□□□ 1.53
CLTCL1P53675 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC24.6■■□□□ 1.53
CLTCL1P53675 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLTCL1P53675 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLTCL1P53675 AKAP8P1-201ENST00000434743 1349 ntBASIC24.6■■□□□ 1.53
CLTCL1P53675 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLTCL1P53675 CD81-202ENST00000381036 880 ntTSL 3 BASIC24.6■■□□□ 1.53
CLTCL1P53675 RNU1-129P-201ENST00000384064 167 ntBASIC24.6■■□□□ 1.53
CLTCL1P53675 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CLTCL1P53675 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC24.6■■□□□ 1.53
CLTCL1P53675 GATB-205ENST00000508611 605 ntTSL 2 BASIC24.6■■□□□ 1.53
CLTCL1P53675 U1.21-201ENST00000580816 167 ntBASIC24.6■■□□□ 1.53
CLTCL1P53675 AL031055.1-201ENST00000606362 631 ntBASIC24.6■■□□□ 1.53
CLTCL1P53675 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLTCL1P53675 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLTCL1P53675 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CLTCL1P53675 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC24.6■■□□□ 1.53
CLTCL1P53675 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CLTCL1P53675 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CLTCL1P53675 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CLTCL1P53675 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC24.59■■□□□ 1.53
CLTCL1P53675 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CLTCL1P53675 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
CLTCL1P53675 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CLTCL1P53675 FAM86GP-201ENST00000448322 971 ntBASIC24.59■■□□□ 1.53
CLTCL1P53675 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC24.59■■□□□ 1.53
CLTCL1P53675 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC24.59■■□□□ 1.53
CLTCL1P53675 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CLTCL1P53675 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC24.59■■□□□ 1.53
CLTCL1P53675 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC24.59■■□□□ 1.53
CLTCL1P53675 CD276-201ENST00000318424 2738 ntTSL 5 BASIC24.59■■□□□ 1.53
CLTCL1P53675 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CLTCL1P53675 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC24.58■■□□□ 1.53
CLTCL1P53675 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CLTCL1P53675 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 PXK-206ENST00000463280 2825 ntTSL 2 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms