Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.51■□□□□ 0.07
LHX2P50458 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.51■□□□□ 0.07
LHX2P50458 MIR940-201ENST00000401276 94 ntBASIC15.51■□□□□ 0.07
LHX2P50458 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 MED15P5-201ENST00000423150 992 ntBASIC15.51■□□□□ 0.07
LHX2P50458 AL591424.1-201ENST00000442569 1213 ntBASIC15.51■□□□□ 0.07
LHX2P50458 AC108073.2-201ENST00000464002 357 ntBASIC15.51■□□□□ 0.07
LHX2P50458 AC140113.2-201ENST00000604370 208 ntBASIC15.51■□□□□ 0.07
LHX2P50458 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
LHX2P50458 FAM197Y3-203ENST00000618346 717 ntBASIC15.51■□□□□ 0.07
LHX2P50458 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.51■□□□□ 0.07
LHX2P50458 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.51■□□□□ 0.07
LHX2P50458 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LHX2P50458 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LHX2P50458 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.51■□□□□ 0.07
LHX2P50458 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LHX2P50458 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.51■□□□□ 0.07
LHX2P50458 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LHX2P50458 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.5■□□□□ 0.07
LHX2P50458 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.5■□□□□ 0.07
LHX2P50458 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.5■□□□□ 0.07
LHX2P50458 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.5■□□□□ 0.07
LHX2P50458 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.5■□□□□ 0.07
LHX2P50458 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.5■□□□□ 0.07
LHX2P50458 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.5■□□□□ 0.07
LHX2P50458 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.5■□□□□ 0.07
LHX2P50458 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.5■□□□□ 0.07
LHX2P50458 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.5■□□□□ 0.07
LHX2P50458 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LHX2P50458 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LHX2P50458 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LHX2P50458 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.49■□□□□ 0.07
LHX2P50458 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LHX2P50458 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
LHX2P50458 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LHX2P50458 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LHX2P50458 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.49■□□□□ 0.07
LHX2P50458 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.49■□□□□ 0.07
LHX2P50458 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LHX2P50458 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LHX2P50458 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.49■□□□□ 0.07
LHX2P50458 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.49■□□□□ 0.07
LHX2P50458 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.49■□□□□ 0.07
LHX2P50458 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.49■□□□□ 0.07
LHX2P50458 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.49■□□□□ 0.07
LHX2P50458 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.49■□□□□ 0.07
LHX2P50458 TERC-201ENST00000602385 541 ntBASIC15.49■□□□□ 0.07
LHX2P50458 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.49■□□□□ 0.07
LHX2P50458 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.49■□□□□ 0.07
LHX2P50458 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LHX2P50458 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LHX2P50458 AC067852.2-201ENST00000590513 2313 ntBASIC15.49■□□□□ 0.07
LHX2P50458 AL138688.1-201ENST00000624851 1594 ntBASIC15.49■□□□□ 0.07
LHX2P50458 AL133373.2-201ENST00000623187 2828 ntBASIC15.49■□□□□ 0.07
LHX2P50458 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.48■□□□□ 0.07
LHX2P50458 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LHX2P50458 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LHX2P50458 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LHX2P50458 PMS2P7-201ENST00000506558 1336 ntBASIC15.48■□□□□ 0.07
LHX2P50458 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.48■□□□□ 0.07
LHX2P50458 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LHX2P50458 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LHX2P50458 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LHX2P50458 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LHX2P50458 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.48■□□□□ 0.07
LHX2P50458 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LHX2P50458 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LHX2P50458 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
LHX2P50458 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms