Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HADHAP40939 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.65■□□□□ 0.42
HADHAP40939 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.65■□□□□ 0.42
HADHAP40939 AC093458.2-201ENST00000623150 629 ntBASIC17.65■□□□□ 0.42
HADHAP40939 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.65■□□□□ 0.42
HADHAP40939 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
HADHAP40939 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HADHAP40939 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HADHAP40939 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HADHAP40939 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.65■□□□□ 0.42
HADHAP40939 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.64■□□□□ 0.42
HADHAP40939 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HADHAP40939 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HADHAP40939 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HADHAP40939 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHAP40939 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHAP40939 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.64■□□□□ 0.41
HADHAP40939 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.64■□□□□ 0.41
HADHAP40939 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.64■□□□□ 0.41
HADHAP40939 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.64■□□□□ 0.41
HADHAP40939 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.64■□□□□ 0.41
HADHAP40939 AC091607.1-201ENST00000490318 1060 ntBASIC17.64■□□□□ 0.41
HADHAP40939 AC104819.1-201ENST00000504587 486 ntBASIC17.64■□□□□ 0.41
HADHAP40939 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.64■□□□□ 0.41
HADHAP40939 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHAP40939 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHAP40939 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HADHAP40939 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HADHAP40939 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.64■□□□□ 0.41
HADHAP40939 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.64■□□□□ 0.41
HADHAP40939 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHAP40939 AC106820.2-201ENST00000563775 3264 ntBASIC17.64■□□□□ 0.41
HADHAP40939 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHAP40939 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.63■□□□□ 0.41
HADHAP40939 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.63■□□□□ 0.41
HADHAP40939 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.63■□□□□ 0.41
HADHAP40939 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.63■□□□□ 0.41
HADHAP40939 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.63■□□□□ 0.41
HADHAP40939 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.63■□□□□ 0.41
HADHAP40939 AP000867.3-201ENST00000524675 377 ntBASIC17.63■□□□□ 0.41
HADHAP40939 AC074051.2-201ENST00000565115 352 ntBASIC17.63■□□□□ 0.41
HADHAP40939 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.63■□□□□ 0.41
HADHAP40939 AC092119.3-201ENST00000612618 583 ntBASIC17.63■□□□□ 0.41
HADHAP40939 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HADHAP40939 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.63■□□□□ 0.41
HADHAP40939 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.63■□□□□ 0.41
HADHAP40939 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HADHAP40939 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HADHAP40939 NSUN5P1-202ENST00000421140 1535 ntBASIC17.62■□□□□ 0.41
HADHAP40939 NSUN5P2-203ENST00000457352 1529 ntBASIC17.62■□□□□ 0.41
HADHAP40939 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
HADHAP40939 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.62■□□□□ 0.41
HADHAP40939 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HADHAP40939 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 MYCLP1-201ENST00000372451 1075 ntBASIC17.62■□□□□ 0.41
HADHAP40939 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HADHAP40939 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HADHAP40939 IGHV3-47-201ENST00000425060 335 ntBASIC17.62■□□□□ 0.41
HADHAP40939 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HADHAP40939 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.62■□□□□ 0.41
HADHAP40939 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.62■□□□□ 0.41
HADHAP40939 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HADHAP40939 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.62■□□□□ 0.41
HADHAP40939 AC011467.2-201ENST00000598425 242 ntBASIC17.62■□□□□ 0.41
HADHAP40939 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms