Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CKS2P33552 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
CKS2P33552 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 AC008040.2-201ENST00000461049 708 ntBASIC12.86□□□□□ -0.35
CKS2P33552 RPS2P4-201ENST00000476944 856 ntBASIC12.86□□□□□ -0.35
CKS2P33552 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.86□□□□□ -0.35
CKS2P33552 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.86□□□□□ -0.35
CKS2P33552 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 AC006449.5-201ENST00000610658 2098 ntBASIC12.85□□□□□ -0.35
CKS2P33552 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS2P33552 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CKS2P33552 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CKS2P33552 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS2P33552 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.85□□□□□ -0.35
CKS2P33552 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CKS2P33552 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CKS2P33552 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.85□□□□□ -0.35
CKS2P33552 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.85□□□□□ -0.35
CKS2P33552 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CKS2P33552 AL162430.1-201ENST00000480705 870 ntBASIC12.85□□□□□ -0.35
CKS2P33552 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.85□□□□□ -0.35
CKS2P33552 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.85□□□□□ -0.35
CKS2P33552 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.85□□□□□ -0.35
CKS2P33552 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CKS2P33552 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CKS2P33552 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.85□□□□□ -0.35
CKS2P33552 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CKS2P33552 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CKS2P33552 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.84□□□□□ -0.35
CKS2P33552 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CKS2P33552 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms