Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 STK25P1-201ENST00000585406 838 ntBASIC17.59■□□□□ 0.41
XPAP23025 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.59■□□□□ 0.41
XPAP23025 AC148477.8-201ENST00000624298 468 ntBASIC17.59■□□□□ 0.41
XPAP23025 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.59■□□□□ 0.41
XPAP23025 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.59■□□□□ 0.41
XPAP23025 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
XPAP23025 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
XPAP23025 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
XPAP23025 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
XPAP23025 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
XPAP23025 SIGLEC16-201ENST00000599858 1437 ntBASIC17.58■□□□□ 0.41
XPAP23025 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
XPAP23025 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
XPAP23025 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
XPAP23025 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
XPAP23025 HLA-A-201ENST00000376802 1334 ntBASIC17.58■□□□□ 0.4
XPAP23025 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
XPAP23025 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.58■□□□□ 0.4
XPAP23025 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.58■□□□□ 0.4
XPAP23025 AC018712.1-201ENST00000455767 687 ntBASIC17.58■□□□□ 0.4
XPAP23025 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
XPAP23025 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.58■□□□□ 0.4
XPAP23025 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
XPAP23025 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
XPAP23025 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.58■□□□□ 0.4
XPAP23025 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
XPAP23025 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
XPAP23025 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 AC004817.3-201ENST00000602957 2129 ntBASIC17.57■□□□□ 0.4
XPAP23025 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 AC005104.2-201ENST00000427818 678 ntBASIC17.57■□□□□ 0.4
XPAP23025 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.57■□□□□ 0.4
XPAP23025 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 AC073592.4-201ENST00000623827 446 ntBASIC17.57■□□□□ 0.4
XPAP23025 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 AC018470.1-201ENST00000624790 3129 ntBASIC17.57■□□□□ 0.4
XPAP23025 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
XPAP23025 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XPAP23025 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.57■□□□□ 0.4
XPAP23025 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
XPAP23025 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
XPAP23025 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms