Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 ABCD1P5-201ENST00000445663 754 ntBASIC17.59■□□□□ 0.41
HLA-DPA1P20036 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.59■□□□□ 0.41
HLA-DPA1P20036 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 AL121772.3-201ENST00000610840 674 ntBASIC17.59■□□□□ 0.41
HLA-DPA1P20036 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-DPA1P20036 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.58■□□□□ 0.41
HLA-DPA1P20036 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
HLA-DPA1P20036 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 AC108860.2-201ENST00000562760 2183 ntBASIC17.57■□□□□ 0.4
HLA-DPA1P20036 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 PRELID1P1-202ENST00000567272 903 ntBASIC17.57■□□□□ 0.4
HLA-DPA1P20036 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DPA1P20036 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DPA1P20036 AC116353.5-201ENST00000638148 1699 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms