Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.32■□□□□ 0.04
ATF1P18846 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ATF1P18846 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 AC087499.1-201ENST00000418141 1075 ntBASIC15.32■□□□□ 0.04
ATF1P18846 LIN28AP1-201ENST00000429574 405 ntBASIC15.32■□□□□ 0.04
ATF1P18846 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.32■□□□□ 0.04
ATF1P18846 KRT18P48-201ENST00000434763 852 ntBASIC15.32■□□□□ 0.04
ATF1P18846 SLC25A3P1-201ENST00000443844 931 ntBASIC15.32■□□□□ 0.04
ATF1P18846 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.32■□□□□ 0.04
ATF1P18846 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.32■□□□□ 0.04
ATF1P18846 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.32■□□□□ 0.04
ATF1P18846 AL031432.5-201ENST00000641059 760 ntBASIC15.32■□□□□ 0.04
ATF1P18846 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.32■□□□□ 0.04
ATF1P18846 KRT8P47-201ENST00000604727 1398 ntBASIC15.32■□□□□ 0.04
ATF1P18846 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATF1P18846 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.32■□□□□ 0.04
ATF1P18846 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.32■□□□□ 0.04
ATF1P18846 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
ATF1P18846 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 AL391005.1-201ENST00000623953 2435 ntBASIC15.31■□□□□ 0.04
ATF1P18846 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.31■□□□□ 0.04
ATF1P18846 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 AC093827.2-201ENST00000512654 315 ntBASIC15.31■□□□□ 0.04
ATF1P18846 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.31■□□□□ 0.04
ATF1P18846 AC004263.2-201ENST00000617183 678 ntBASIC15.31■□□□□ 0.04
ATF1P18846 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.31■□□□□ 0.04
ATF1P18846 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.31■□□□□ 0.04
ATF1P18846 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.31■□□□□ 0.04
ATF1P18846 RNF216P1-203ENST00000404404 2427 ntBASIC15.31■□□□□ 0.04
ATF1P18846 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATF1P18846 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.3■□□□□ 0.04
ATF1P18846 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATF1P18846 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.3■□□□□ 0.04
ATF1P18846 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.3■□□□□ 0.04
ATF1P18846 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.3■□□□□ 0.04
ATF1P18846 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.3■□□□□ 0.04
ATF1P18846 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 TSPY12P-201ENST00000421279 868 ntBASIC15.3■□□□□ 0.04
ATF1P18846 ATP5G1P1-201ENST00000448724 379 ntBASIC15.3■□□□□ 0.04
ATF1P18846 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 COX11P1-201ENST00000489116 835 ntBASIC15.3■□□□□ 0.04
ATF1P18846 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.3■□□□□ 0.04
ATF1P18846 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ATF1P18846 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 AC079328.2-201ENST00000561241 3354 ntBASIC15.3■□□□□ 0.04
ATF1P18846 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.3■□□□□ 0.04
ATF1P18846 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.3■□□□□ 0.04
ATF1P18846 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.3■□□□□ 0.04
ATF1P18846 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATF1P18846 AC026691.1-201ENST00000602502 2017 ntBASIC15.3■□□□□ 0.04
ATF1P18846 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.3■□□□□ 0.04
ATF1P18846 AC009154.2-201ENST00000621177 724 ntBASIC15.3■□□□□ 0.04
ATF1P18846 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms