Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HMGA1P17096 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
HMGA1P17096 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.95■□□□□ 0.46
HMGA1P17096 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HMGA1P17096 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HMGA1P17096 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HMGA1P17096 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
HMGA1P17096 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.95■□□□□ 0.46
HMGA1P17096 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
HMGA1P17096 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA1P17096 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.95■□□□□ 0.46
HMGA1P17096 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA1P17096 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGA1P17096 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGA1P17096 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
HMGA1P17096 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGA1P17096 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGA1P17096 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 ELL2P1-201ENST00000413990 1906 ntBASIC17.94■□□□□ 0.46
HMGA1P17096 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HMGA1P17096 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGA1P17096 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.94■□□□□ 0.46
HMGA1P17096 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.94■□□□□ 0.46
HMGA1P17096 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.94■□□□□ 0.46
HMGA1P17096 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGA1P17096 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
HMGA1P17096 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGA1P17096 AL031432.2-201ENST00000566714 459 ntBASIC17.94■□□□□ 0.46
HMGA1P17096 AL928711.1-201ENST00000570165 459 ntBASIC17.94■□□□□ 0.46
HMGA1P17096 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.94■□□□□ 0.46
HMGA1P17096 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGA1P17096 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGA1P17096 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGA1P17096 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HMGA1P17096 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGA1P17096 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGA1P17096 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HMGA1P17096 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA1P17096 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA1P17096 AC107918.2-201ENST00000530817 355 ntBASIC17.93■□□□□ 0.46
HMGA1P17096 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HMGA1P17096 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGA1P17096 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA1P17096 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGA1P17096 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGA1P17096 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HMGA1P17096 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA1P17096 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGA1P17096 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA1P17096 AC129492.6-201ENST00000611383 1305 ntBASIC17.93■□□□□ 0.46
HMGA1P17096 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HMGA1P17096 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGA1P17096 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGA1P17096 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGA1P17096 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA1P17096 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGA1P17096 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA1P17096 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA1P17096 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA1P17096 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA1P17096 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGA1P17096 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA1P17096 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGA1P17096 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.92■□□□□ 0.46
HMGA1P17096 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HMGA1P17096 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.92■□□□□ 0.46
HMGA1P17096 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGA1P17096 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGA1P17096 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGA1P17096 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
HMGA1P17096 AL596442.2-201ENST00000610240 980 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms