Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFRAP16234 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.29■□□□□ 0.52
PDGFRAP16234 EMBP1-201ENST00000458200 901 ntBASIC18.29■□□□□ 0.52
PDGFRAP16234 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFRAP16234 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.29■□□□□ 0.52
PDGFRAP16234 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.29■□□□□ 0.52
PDGFRAP16234 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDGFRAP16234 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PDGFRAP16234 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.29■□□□□ 0.52
PDGFRAP16234 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.29■□□□□ 0.52
PDGFRAP16234 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDGFRAP16234 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PDGFRAP16234 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PDGFRAP16234 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.28■□□□□ 0.52
PDGFRAP16234 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 AC004870.1-201ENST00000315132 882 ntBASIC18.28■□□□□ 0.52
PDGFRAP16234 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PDGFRAP16234 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 STK19B-204ENST00000512515 211 ntBASIC18.28■□□□□ 0.52
PDGFRAP16234 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.28■□□□□ 0.52
PDGFRAP16234 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.28■□□□□ 0.52
PDGFRAP16234 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 PMPCAP1-201ENST00000508114 1576 ntBASIC18.28■□□□□ 0.52
PDGFRAP16234 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.28■□□□□ 0.52
PDGFRAP16234 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.28■□□□□ 0.52
PDGFRAP16234 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDGFRAP16234 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
PDGFRAP16234 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.27■□□□□ 0.52
PDGFRAP16234 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PDGFRAP16234 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PDGFRAP16234 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PDGFRAP16234 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.27■□□□□ 0.52
PDGFRAP16234 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.27■□□□□ 0.52
PDGFRAP16234 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 AC003669.1-201ENST00000334569 611 ntBASIC18.27■□□□□ 0.52
PDGFRAP16234 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.27■□□□□ 0.52
PDGFRAP16234 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.27■□□□□ 0.52
PDGFRAP16234 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDGFRAP16234 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.27■□□□□ 0.52
PDGFRAP16234 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.27■□□□□ 0.52
PDGFRAP16234 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 AP000867.4-201ENST00000641616 219 ntBASIC18.27■□□□□ 0.52
PDGFRAP16234 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDGFRAP16234 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PDGFRAP16234 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDGFRAP16234 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.27■□□□□ 0.51
PDGFRAP16234 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDGFRAP16234 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDGFRAP16234 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PDGFRAP16234 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PDGFRAP16234 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PDGFRAP16234 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.27■□□□□ 0.51
PDGFRAP16234 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 AC012313.1-201ENST00000593393 3059 ntBASIC18.26■□□□□ 0.51
PDGFRAP16234 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PDGFRAP16234 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDGFRAP16234 AC009336.1-201ENST00000608941 1553 ntBASIC18.26■□□□□ 0.51
PDGFRAP16234 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDGFRAP16234 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.26■□□□□ 0.51
PDGFRAP16234 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms