Protein–RNA interactions for Protein: P13688

CEACAM1, Carcinoembryonic antigen-related cell adhesion molecule 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1P13688 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM1P13688 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CEACAM1P13688 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.51■□□□□ 0.23
CEACAM1P13688 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.51■□□□□ 0.23
CEACAM1P13688 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.5■□□□□ 0.23
CEACAM1P13688 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.5■□□□□ 0.23
CEACAM1P13688 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 U91328.1-201ENST00000437528 223 ntBASIC16.5■□□□□ 0.23
CEACAM1P13688 AC245100.3-201ENST00000441281 285 ntBASIC16.5■□□□□ 0.23
CEACAM1P13688 ALG1L8P-201ENST00000533887 760 ntBASIC16.5■□□□□ 0.23
CEACAM1P13688 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.5■□□□□ 0.23
CEACAM1P13688 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.5■□□□□ 0.23
CEACAM1P13688 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CEACAM1P13688 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.5■□□□□ 0.23
CEACAM1P13688 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CEACAM1P13688 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CEACAM1P13688 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CEACAM1P13688 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CEACAM1P13688 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CEACAM1P13688 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CEACAM1P13688 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CEACAM1P13688 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.49■□□□□ 0.23
CEACAM1P13688 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.49■□□□□ 0.23
CEACAM1P13688 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.49■□□□□ 0.23
CEACAM1P13688 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.49■□□□□ 0.23
CEACAM1P13688 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.49■□□□□ 0.23
CEACAM1P13688 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.49■□□□□ 0.23
CEACAM1P13688 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.49■□□□□ 0.23
CEACAM1P13688 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.49■□□□□ 0.23
CEACAM1P13688 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.49■□□□□ 0.23
CEACAM1P13688 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CEACAM1P13688 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CEACAM1P13688 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CEACAM1P13688 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CEACAM1P13688 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.48■□□□□ 0.23
CEACAM1P13688 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.48■□□□□ 0.23
CEACAM1P13688 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.48■□□□□ 0.23
CEACAM1P13688 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CEACAM1P13688 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.48■□□□□ 0.23
CEACAM1P13688 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CEACAM1P13688 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.48■□□□□ 0.23
CEACAM1P13688 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CEACAM1P13688 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.48■□□□□ 0.23
CEACAM1P13688 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.48■□□□□ 0.23
CEACAM1P13688 AC027369.6-201ENST00000525520 931 ntBASIC16.48■□□□□ 0.23
CEACAM1P13688 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.48■□□□□ 0.23
CEACAM1P13688 AL590560.3-201ENST00000623350 461 ntBASIC16.48■□□□□ 0.23
CEACAM1P13688 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CEACAM1P13688 TNXA-203ENST00000507684 2038 ntBASIC16.48■□□□□ 0.23
CEACAM1P13688 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.48■□□□□ 0.23
CEACAM1P13688 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CEACAM1P13688 AC093677.2-201ENST00000600169 1863 ntBASIC16.48■□□□□ 0.23
CEACAM1P13688 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM1P13688 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM1P13688 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM1P13688 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CEACAM1P13688 AC022144.1-201ENST00000602255 1580 ntBASIC16.47■□□□□ 0.23
CEACAM1P13688 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.47■□□□□ 0.23
CEACAM1P13688 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.47■□□□□ 0.23
CEACAM1P13688 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CEACAM1P13688 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM1P13688 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CEACAM1P13688 AC100757.3-201ENST00000622361 1406 ntBASIC16.47■□□□□ 0.23
CEACAM1P13688 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms