Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.04■□□□□ 0.16
THBS1P07996 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.04■□□□□ 0.16
THBS1P07996 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
THBS1P07996 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.04■□□□□ 0.16
THBS1P07996 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.04■□□□□ 0.16
THBS1P07996 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.04■□□□□ 0.16
THBS1P07996 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 AC106820.2-201ENST00000563775 3264 ntBASIC16.04■□□□□ 0.16
THBS1P07996 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
THBS1P07996 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.04■□□□□ 0.16
THBS1P07996 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
THBS1P07996 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
THBS1P07996 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
THBS1P07996 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
THBS1P07996 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
THBS1P07996 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 AC003669.1-201ENST00000334569 611 ntBASIC16.03■□□□□ 0.16
THBS1P07996 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.03■□□□□ 0.16
THBS1P07996 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.03■□□□□ 0.16
THBS1P07996 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.03■□□□□ 0.16
THBS1P07996 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 AD001527.2-201ENST00000622994 785 ntBASIC16.03■□□□□ 0.16
THBS1P07996 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.03■□□□□ 0.16
THBS1P07996 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 AC009336.1-201ENST00000608941 1553 ntBASIC16.03■□□□□ 0.16
THBS1P07996 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.03■□□□□ 0.16
THBS1P07996 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.03■□□□□ 0.16
THBS1P07996 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 TP73-AS1-210ENST00000637775 1455 ntBASIC16.03■□□□□ 0.16
THBS1P07996 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THBS1P07996 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.02■□□□□ 0.16
THBS1P07996 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.02■□□□□ 0.16
THBS1P07996 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
THBS1P07996 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
THBS1P07996 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.02■□□□□ 0.16
THBS1P07996 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
THBS1P07996 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THBS1P07996 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.02■□□□□ 0.16
THBS1P07996 STK19B-204ENST00000512515 211 ntBASIC16.02■□□□□ 0.16
THBS1P07996 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.02■□□□□ 0.16
THBS1P07996 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.02■□□□□ 0.16
THBS1P07996 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.02■□□□□ 0.16
THBS1P07996 TPSP2-201ENST00000561760 610 ntBASIC16.02■□□□□ 0.16
THBS1P07996 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.02■□□□□ 0.16
THBS1P07996 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.02■□□□□ 0.15
THBS1P07996 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.02■□□□□ 0.15
THBS1P07996 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
THBS1P07996 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
THBS1P07996 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
THBS1P07996 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
THBS1P07996 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
THBS1P07996 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.01■□□□□ 0.15
THBS1P07996 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.01■□□□□ 0.15
THBS1P07996 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
THBS1P07996 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.01■□□□□ 0.15
THBS1P07996 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 AC060834.1-201ENST00000443027 2032 ntBASIC16.01■□□□□ 0.15
THBS1P07996 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THBS1P07996 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms