Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
P04436 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
P04436 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.92■□□□□ 0.14
P04436 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
P04436 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
P04436 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.92■□□□□ 0.14
P04436 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
P04436 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
P04436 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.92■□□□□ 0.14
P04436 AC046185.3-201ENST00000623228 1824 ntBASIC15.91■□□□□ 0.14
P04436 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
P04436 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
P04436 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
P04436 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.91■□□□□ 0.14
P04436 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.91■□□□□ 0.14
P04436 SLC25A1P1-201ENST00000528351 927 ntBASIC15.91■□□□□ 0.14
P04436 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.91■□□□□ 0.14
P04436 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
P04436 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.91■□□□□ 0.14
P04436 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.91■□□□□ 0.14
P04436 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
P04436 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.91■□□□□ 0.14
P04436 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04436 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
P04436 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.9■□□□□ 0.14
P04436 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
P04436 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.9■□□□□ 0.14
P04436 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
P04436 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.9■□□□□ 0.14
P04436 PMS2P1-201ENST00000431037 1228 ntBASIC15.9■□□□□ 0.14
P04436 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.9■□□□□ 0.14
P04436 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.9■□□□□ 0.14
P04436 IGHV3-22-201ENST00000520721 359 ntBASIC15.9■□□□□ 0.14
P04436 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.9■□□□□ 0.14
P04436 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.9■□□□□ 0.14
P04436 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.9■□□□□ 0.14
P04436 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.9■□□□□ 0.14
P04436 AC106730.1-201ENST00000566722 1090 ntBASIC15.9■□□□□ 0.14
P04436 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.9■□□□□ 0.14
P04436 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.9■□□□□ 0.14
P04436 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
P04436 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
P04436 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.9■□□□□ 0.14
P04436 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.9■□□□□ 0.14
P04436 LINC00304-203ENST00000565008 1864 ntBASIC15.9■□□□□ 0.14
P04436 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.9■□□□□ 0.14
P04436 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
P04436 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04436 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04436 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04436 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04436 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.89■□□□□ 0.13
P04436 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04436 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
P04436 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04436 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04436 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04436 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms