Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFBP01127 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFBP01127 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.35■□□□□ 0.37
PDGFBP01127 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.35■□□□□ 0.37
PDGFBP01127 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.35■□□□□ 0.37
PDGFBP01127 AC002558.1-201ENST00000488906 803 ntBASIC17.35■□□□□ 0.37
PDGFBP01127 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.35■□□□□ 0.37
PDGFBP01127 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.35■□□□□ 0.37
PDGFBP01127 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.35■□□□□ 0.37
PDGFBP01127 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.35■□□□□ 0.37
PDGFBP01127 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.35■□□□□ 0.37
PDGFBP01127 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.35■□□□□ 0.37
PDGFBP01127 MIR4515-201ENST00000584082 81 ntBASIC17.35■□□□□ 0.37
PDGFBP01127 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.35■□□□□ 0.37
PDGFBP01127 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.35■□□□□ 0.37
PDGFBP01127 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFBP01127 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.35■□□□□ 0.37
PDGFBP01127 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFBP01127 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PDGFBP01127 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFBP01127 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFBP01127 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFBP01127 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFBP01127 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFBP01127 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFBP01127 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFBP01127 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFBP01127 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFBP01127 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFBP01127 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PDGFBP01127 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.34■□□□□ 0.37
PDGFBP01127 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.34■□□□□ 0.37
PDGFBP01127 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFBP01127 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.34■□□□□ 0.37
PDGFBP01127 AC138969.3-201ENST00000546612 1459 ntBASIC17.34■□□□□ 0.37
PDGFBP01127 AC138932.2-201ENST00000548268 1459 ntBASIC17.34■□□□□ 0.37
PDGFBP01127 AC126755.4-201ENST00000549796 1459 ntBASIC17.34■□□□□ 0.37
PDGFBP01127 TP53TG3HP-202ENST00000569755 579 ntBASIC17.34■□□□□ 0.37
PDGFBP01127 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFBP01127 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFBP01127 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.34■□□□□ 0.37
PDGFBP01127 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 AC017083.2-201ENST00000608069 979 ntBASIC17.34■□□□□ 0.37
PDGFBP01127 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFBP01127 IGHV3-72-202ENST00000621503 303 ntBASIC17.34■□□□□ 0.37
PDGFBP01127 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFBP01127 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDGFBP01127 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.33■□□□□ 0.37
PDGFBP01127 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFBP01127 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.33■□□□□ 0.37
PDGFBP01127 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.33■□□□□ 0.37
PDGFBP01127 AC093677.2-201ENST00000600169 1863 ntBASIC17.33■□□□□ 0.37
PDGFBP01127 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.33■□□□□ 0.37
PDGFBP01127 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFBP01127 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.33■□□□□ 0.37
PDGFBP01127 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.33■□□□□ 0.36
PDGFBP01127 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PDGFBP01127 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PDGFBP01127 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFBP01127 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFBP01127 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.33■□□□□ 0.36
PDGFBP01127 GIMAP3P-201ENST00000495150 836 ntBASIC17.33■□□□□ 0.36
PDGFBP01127 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.33■□□□□ 0.36
PDGFBP01127 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFBP01127 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFBP01127 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFBP01127 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 AC005332.7-201ENST00000614046 2005 ntBASIC17.33■□□□□ 0.36
PDGFBP01127 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFBP01127 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFBP01127 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFBP01127 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFBP01127 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFBP01127 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFBP01127 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.32■□□□□ 0.36
PDGFBP01127 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PDGFBP01127 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.32■□□□□ 0.36
PDGFBP01127 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.32■□□□□ 0.36
PDGFBP01127 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.32■□□□□ 0.36
PDGFBP01127 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFBP01127 AP000842.3-202ENST00000569238 1080 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms