Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
GPC4O75487 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
GPC4O75487 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.49■□□□□ 0.39
GPC4O75487 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.49■□□□□ 0.39
GPC4O75487 AC011840.4-201ENST00000578471 627 ntBASIC17.49■□□□□ 0.39
GPC4O75487 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.49■□□□□ 0.39
GPC4O75487 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.49■□□□□ 0.39
GPC4O75487 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GPC4O75487 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC4O75487 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GPC4O75487 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GPC4O75487 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GPC4O75487 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC4O75487 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC4O75487 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GPC4O75487 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC4O75487 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.48■□□□□ 0.39
GPC4O75487 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC4O75487 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
GPC4O75487 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.48■□□□□ 0.39
GPC4O75487 DDX43P3-201ENST00000441064 443 ntBASIC17.48■□□□□ 0.39
GPC4O75487 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GPC4O75487 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.48■□□□□ 0.39
GPC4O75487 AC005336.2-201ENST00000593183 939 ntBASIC17.48■□□□□ 0.39
GPC4O75487 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.48■□□□□ 0.39
GPC4O75487 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.48■□□□□ 0.39
GPC4O75487 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
GPC4O75487 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GPC4O75487 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.48■□□□□ 0.39
GPC4O75487 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
GPC4O75487 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC4O75487 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.47■□□□□ 0.39
GPC4O75487 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC4O75487 AC091607.1-201ENST00000490318 1060 ntBASIC17.47■□□□□ 0.39
GPC4O75487 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC4O75487 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.47■□□□□ 0.39
GPC4O75487 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC4O75487 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC4O75487 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms