Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF253O75346 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF253O75346 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF253O75346 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ZNF253O75346 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF253O75346 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 LINC00304-203ENST00000565008 1864 ntBASIC13.62□□□□□ -0.23
ZNF253O75346 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF253O75346 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 DDX43P3-201ENST00000441064 443 ntBASIC13.62□□□□□ -0.23
ZNF253O75346 TSPY20P-201ENST00000450910 630 ntBASIC13.62□□□□□ -0.23
ZNF253O75346 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF253O75346 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF253O75346 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF253O75346 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF253O75346 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ZNF253O75346 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ZNF253O75346 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ZNF253O75346 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZNF253O75346 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 LINC00167-201ENST00000530583 1419 ntBASIC13.62□□□□□ -0.23
ZNF253O75346 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 LINC02199-201ENST00000506655 2702 ntBASIC13.62□□□□□ -0.23
ZNF253O75346 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF253O75346 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF253O75346 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 NORAD-201ENST00000565493 5339 ntBASIC13.61□□□□□ -0.23
ZNF253O75346 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF253O75346 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF253O75346 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF253O75346 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF253O75346 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.61□□□□□ -0.23
ZNF253O75346 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF253O75346 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF253O75346 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF253O75346 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 AP000523.1-201ENST00000398242 1049 ntBASIC13.61□□□□□ -0.23
ZNF253O75346 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF253O75346 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF253O75346 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF253O75346 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
ZNF253O75346 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF253O75346 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF253O75346 MIR3917-201ENST00000580971 93 ntBASIC13.61□□□□□ -0.23
ZNF253O75346 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF253O75346 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ZNF253O75346 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF253O75346 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF253O75346 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF253O75346 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF253O75346 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms