Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF11O60813 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF11O60813 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF11O60813 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF11O60813 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF11O60813 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 LETM1P2-201ENST00000597330 2178 ntBASIC17.63■□□□□ 0.41
PRAMEF11O60813 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 AL662844.1-201ENST00000546340 181 ntBASIC17.63■□□□□ 0.41
PRAMEF11O60813 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 AL139424.1-201ENST00000607572 797 ntBASIC17.63■□□□□ 0.41
PRAMEF11O60813 AC004706.3-202ENST00000621574 984 ntBASIC17.63■□□□□ 0.41
PRAMEF11O60813 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 AC093525.9-201ENST00000624961 1746 ntBASIC17.63■□□□□ 0.41
PRAMEF11O60813 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PRAMEF11O60813 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF11O60813 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 AL645608.8-201ENST00000606034 2086 ntBASIC17.62■□□□□ 0.41
PRAMEF11O60813 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 RNA5SP419-201ENST00000515908 135 ntBASIC17.62■□□□□ 0.41
PRAMEF11O60813 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 FAM215A-202ENST00000632077 792 ntBASIC17.62■□□□□ 0.41
PRAMEF11O60813 AC090340.1-201ENST00000620778 4980 ntBASIC17.62■□□□□ 0.41
PRAMEF11O60813 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRAMEF11O60813 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.62■□□□□ 0.41
PRAMEF11O60813 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AL031284.1-201ENST00000419297 478 ntBASIC17.61■□□□□ 0.41
PRAMEF11O60813 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC006557.2-201ENST00000592985 1240 ntBASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 AC008735.5-201ENST00000623544 497 ntBASIC17.61■□□□□ 0.41
PRAMEF11O60813 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEF11O60813 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEF11O60813 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms