Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TSPAN3O60637 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TSPAN3O60637 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
TSPAN3O60637 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
TSPAN3O60637 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
TSPAN3O60637 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TSPAN3O60637 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.95■□□□□ 0.46
TSPAN3O60637 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.95■□□□□ 0.46
TSPAN3O60637 SLC25A6P5-201ENST00000435663 894 ntBASIC17.95■□□□□ 0.46
TSPAN3O60637 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.95■□□□□ 0.46
TSPAN3O60637 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.95■□□□□ 0.46
TSPAN3O60637 AC006557.2-201ENST00000592985 1240 ntBASIC17.95■□□□□ 0.46
TSPAN3O60637 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.95■□□□□ 0.46
TSPAN3O60637 AC006538.3-201ENST00000612495 578 ntBASIC17.95■□□□□ 0.46
TSPAN3O60637 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
TSPAN3O60637 LINC01451-201ENST00000623792 534 ntBASIC17.95■□□□□ 0.46
TSPAN3O60637 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 AC006504.4-201ENST00000592118 1568 ntBASIC17.95■□□□□ 0.46
TSPAN3O60637 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.95■□□□□ 0.46
TSPAN3O60637 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TSPAN3O60637 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.95■□□□□ 0.46
TSPAN3O60637 LINC00304-203ENST00000565008 1864 ntBASIC17.95■□□□□ 0.46
TSPAN3O60637 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 AC073621.1-201ENST00000392730 636 ntBASIC17.94■□□□□ 0.46
TSPAN3O60637 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 PMS2P1-201ENST00000431037 1228 ntBASIC17.94■□□□□ 0.46
TSPAN3O60637 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 UNC93B6-202ENST00000528242 690 ntBASIC17.94■□□□□ 0.46
TSPAN3O60637 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TSPAN3O60637 MIR1199-201ENST00000621445 119 ntBASIC17.94■□□□□ 0.46
TSPAN3O60637 AC004706.3-202ENST00000621574 984 ntBASIC17.94■□□□□ 0.46
TSPAN3O60637 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 NCF1C-201ENST00000438382 1427 ntBASIC17.94■□□□□ 0.46
TSPAN3O60637 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TSPAN3O60637 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TSPAN3O60637 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TSPAN3O60637 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.93■□□□□ 0.46
TSPAN3O60637 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.93■□□□□ 0.46
TSPAN3O60637 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.93■□□□□ 0.46
TSPAN3O60637 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
TSPAN3O60637 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TSPAN3O60637 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
TSPAN3O60637 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.93■□□□□ 0.46
TSPAN3O60637 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.93■□□□□ 0.46
TSPAN3O60637 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TSPAN3O60637 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TSPAN3O60637 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TSPAN3O60637 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.93■□□□□ 0.46
TSPAN3O60637 ELK2BP-201ENST00000415014 1224 ntBASIC17.93■□□□□ 0.46
TSPAN3O60637 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TSPAN3O60637 KRT18P27-201ENST00000427733 1299 ntBASIC17.93■□□□□ 0.46
TSPAN3O60637 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.93■□□□□ 0.46
TSPAN3O60637 POLD2P1-201ENST00000511220 997 ntBASIC17.93■□□□□ 0.46
TSPAN3O60637 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.93■□□□□ 0.46
TSPAN3O60637 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms