Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
PLOD3O60568 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.45■□□□□ 0.22
PLOD3O60568 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 AC084018.2-201ENST00000613093 2607 ntBASIC16.45■□□□□ 0.22
PLOD3O60568 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PLOD3O60568 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 NSUN5P1-202ENST00000421140 1535 ntBASIC16.45■□□□□ 0.22
PLOD3O60568 NSUN5P2-203ENST00000457352 1529 ntBASIC16.45■□□□□ 0.22
PLOD3O60568 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PLOD3O60568 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PLOD3O60568 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
PLOD3O60568 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PLOD3O60568 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PLOD3O60568 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 MINOS1P3-201ENST00000457048 203 ntBASIC16.44■□□□□ 0.22
PLOD3O60568 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.44■□□□□ 0.22
PLOD3O60568 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.44■□□□□ 0.22
PLOD3O60568 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.44■□□□□ 0.22
PLOD3O60568 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.44■□□□□ 0.22
PLOD3O60568 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PLOD3O60568 AC012615.1-201ENST00000565797 1299 ntBASIC16.44■□□□□ 0.22
PLOD3O60568 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.44■□□□□ 0.22
PLOD3O60568 AC019129.2-201ENST00000609837 1235 ntBASIC16.44■□□□□ 0.22
PLOD3O60568 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
PLOD3O60568 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PLOD3O60568 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.44■□□□□ 0.22
PLOD3O60568 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PLOD3O60568 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PLOD3O60568 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.44■□□□□ 0.22
PLOD3O60568 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.43■□□□□ 0.22
PLOD3O60568 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PLOD3O60568 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.43■□□□□ 0.22
PLOD3O60568 TP73-AS1-210ENST00000637775 1455 ntBASIC16.43■□□□□ 0.22
PLOD3O60568 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PLOD3O60568 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 MYCLP1-201ENST00000372451 1075 ntBASIC16.43■□□□□ 0.22
PLOD3O60568 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.43■□□□□ 0.22
PLOD3O60568 UPK3BP1-201ENST00000428678 509 ntBASIC16.43■□□□□ 0.22
PLOD3O60568 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 AC104819.1-201ENST00000504587 486 ntBASIC16.43■□□□□ 0.22
PLOD3O60568 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.43■□□□□ 0.22
PLOD3O60568 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.43■□□□□ 0.22
PLOD3O60568 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 BNIP3P18-201ENST00000593976 575 ntBASIC16.43■□□□□ 0.22
PLOD3O60568 AC092119.3-201ENST00000612618 583 ntBASIC16.43■□□□□ 0.22
PLOD3O60568 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PLOD3O60568 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.43■□□□□ 0.22
PLOD3O60568 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PLOD3O60568 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 PKD1P5-201ENST00000532415 10291 ntBASIC16.43■□□□□ 0.22
PLOD3O60568 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PLOD3O60568 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms