Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.16■□□□□ 0.02
XRCC2O43543 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
XRCC2O43543 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.16■□□□□ 0.02
XRCC2O43543 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 AC233702.3-201ENST00000578656 1387 ntBASIC15.16■□□□□ 0.02
XRCC2O43543 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.16■□□□□ 0.02
XRCC2O43543 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.16■□□□□ 0.02
XRCC2O43543 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
XRCC2O43543 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.16■□□□□ 0.02
XRCC2O43543 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
XRCC2O43543 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.16■□□□□ 0.02
XRCC2O43543 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.16■□□□□ 0.02
XRCC2O43543 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.16■□□□□ 0.02
XRCC2O43543 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.16■□□□□ 0.02
XRCC2O43543 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.16■□□□□ 0.02
XRCC2O43543 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.16■□□□□ 0.02
XRCC2O43543 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.16■□□□□ 0.02
XRCC2O43543 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
XRCC2O43543 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
XRCC2O43543 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.15■□□□□ 0.02
XRCC2O43543 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
XRCC2O43543 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
XRCC2O43543 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
XRCC2O43543 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
XRCC2O43543 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.15■□□□□ 0.02
XRCC2O43543 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
XRCC2O43543 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.15■□□□□ 0.02
XRCC2O43543 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.15■□□□□ 0.02
XRCC2O43543 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.15■□□□□ 0.02
XRCC2O43543 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.15■□□□□ 0.02
XRCC2O43543 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
XRCC2O43543 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.15■□□□□ 0.02
XRCC2O43543 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
XRCC2O43543 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
XRCC2O43543 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
XRCC2O43543 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
XRCC2O43543 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
XRCC2O43543 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
XRCC2O43543 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
XRCC2O43543 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
XRCC2O43543 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
XRCC2O43543 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
XRCC2O43543 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
XRCC2O43543 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.14■□□□□ 0.01
XRCC2O43543 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
XRCC2O43543 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms