Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.33■□□□□ 0.2
RRP8O43159 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RRP8O43159 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RRP8O43159 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RRP8O43159 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RRP8O43159 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RRP8O43159 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.32■□□□□ 0.2
RRP8O43159 AC005082.1-201ENST00000413042 2259 ntBASIC16.32■□□□□ 0.2
RRP8O43159 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.32■□□□□ 0.2
RRP8O43159 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.32■□□□□ 0.2
RRP8O43159 SPDYE11-202ENST00000450699 704 ntBASIC16.32■□□□□ 0.2
RRP8O43159 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RRP8O43159 STK19B-204ENST00000512515 211 ntBASIC16.32■□□□□ 0.2
RRP8O43159 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.32■□□□□ 0.2
RRP8O43159 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.32■□□□□ 0.2
RRP8O43159 SPDYE9P-201ENST00000570642 692 ntBASIC16.32■□□□□ 0.2
RRP8O43159 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.32■□□□□ 0.2
RRP8O43159 AL359881.2-201ENST00000602973 570 ntBASIC16.32■□□□□ 0.2
RRP8O43159 SPDYE10P-202ENST00000612005 668 ntBASIC16.32■□□□□ 0.2
RRP8O43159 SPDYE8P-202ENST00000612377 668 ntBASIC16.32■□□□□ 0.2
RRP8O43159 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.32■□□□□ 0.2
RRP8O43159 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.32■□□□□ 0.2
RRP8O43159 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RRP8O43159 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RRP8O43159 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RRP8O43159 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RRP8O43159 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.31■□□□□ 0.2
RRP8O43159 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 TUBB3P1-201ENST00000405796 1332 ntBASIC16.31■□□□□ 0.2
RRP8O43159 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 AL513480.1-201ENST00000451731 511 ntBASIC16.31■□□□□ 0.2
RRP8O43159 AL512638.1-201ENST00000457493 794 ntBASIC16.31■□□□□ 0.2
RRP8O43159 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.31■□□□□ 0.2
RRP8O43159 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.31■□□□□ 0.2
RRP8O43159 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RRP8O43159 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RRP8O43159 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RRP8O43159 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRP8O43159 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.3■□□□□ 0.2
RRP8O43159 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
RRP8O43159 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RRP8O43159 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 AC006116.8-202ENST00000587620 1550 ntBASIC16.3■□□□□ 0.2
RRP8O43159 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RRP8O43159 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RRP8O43159 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RRP8O43159 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RRP8O43159 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RRP8O43159 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRP8O43159 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.3■□□□□ 0.2
RRP8O43159 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms