Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN4O14493 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN4O14493 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN4O14493 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN4O14493 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN4O14493 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN4O14493 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN4O14493 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 PRYP5-201ENST00000451909 266 ntBASIC16.42■□□□□ 0.22
CLDN4O14493 FGFR3P6-201ENST00000457012 610 ntBASIC16.42■□□□□ 0.22
CLDN4O14493 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN4O14493 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.42■□□□□ 0.22
CLDN4O14493 AC064862.7-201ENST00000604520 867 ntBASIC16.42■□□□□ 0.22
CLDN4O14493 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN4O14493 AC073592.4-201ENST00000623827 446 ntBASIC16.42■□□□□ 0.22
CLDN4O14493 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLDN4O14493 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLDN4O14493 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CLDN4O14493 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLDN4O14493 AC046185.3-201ENST00000623228 1824 ntBASIC16.42■□□□□ 0.22
CLDN4O14493 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN4O14493 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 LYSMD4-203ENST00000378904 2122 ntBASIC16.42■□□□□ 0.22
CLDN4O14493 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN4O14493 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CLDN4O14493 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CLDN4O14493 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN4O14493 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN4O14493 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN4O14493 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN4O14493 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN4O14493 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CLDN4O14493 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CLDN4O14493 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN4O14493 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN4O14493 NKAPP1-205ENST00000585790 367 ntBASIC16.41■□□□□ 0.22
CLDN4O14493 AL022326.1-202ENST00000641533 845 ntBASIC16.41■□□□□ 0.22
CLDN4O14493 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN4O14493 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 AL138688.1-201ENST00000624851 1594 ntBASIC16.41■□□□□ 0.22
CLDN4O14493 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN4O14493 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CLDN4O14493 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN4O14493 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN4O14493 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLDN4O14493 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN4O14493 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.4■□□□□ 0.22
CLDN4O14493 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 AC073648.2-201ENST00000510116 352 ntBASIC16.4■□□□□ 0.22
CLDN4O14493 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms