Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.79■□□□□ 0.92
NFKBIEO00221 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.79■□□□□ 0.92
NFKBIEO00221 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKBIEO00221 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.78■□□□□ 0.92
NFKBIEO00221 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKBIEO00221 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
NFKBIEO00221 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKBIEO00221 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.78■□□□□ 0.92
NFKBIEO00221 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.78■□□□□ 0.92
NFKBIEO00221 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.78■□□□□ 0.92
NFKBIEO00221 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.78■□□□□ 0.92
NFKBIEO00221 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKBIEO00221 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKBIEO00221 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKBIEO00221 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.78■□□□□ 0.92
NFKBIEO00221 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.78■□□□□ 0.92
NFKBIEO00221 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKBIEO00221 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKBIEO00221 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
NFKBIEO00221 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NFKBIEO00221 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKBIEO00221 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.77■□□□□ 0.92
NFKBIEO00221 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NFKBIEO00221 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.77■□□□□ 0.92
NFKBIEO00221 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.77■□□□□ 0.92
NFKBIEO00221 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.77■□□□□ 0.92
NFKBIEO00221 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.77■□□□□ 0.92
NFKBIEO00221 AL606495.2-201ENST00000605867 535 ntBASIC20.77■□□□□ 0.92
NFKBIEO00221 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.77■□□□□ 0.92
NFKBIEO00221 AL138828.2-201ENST00000615812 383 ntBASIC20.77■□□□□ 0.92
NFKBIEO00221 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKBIEO00221 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKBIEO00221 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKBIEO00221 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NFKBIEO00221 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NFKBIEO00221 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NFKBIEO00221 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
NFKBIEO00221 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NFKBIEO00221 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKBIEO00221 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 AC135776.1-201ENST00000319817 2481 ntBASIC20.76■□□□□ 0.91
NFKBIEO00221 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NFKBIEO00221 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NFKBIEO00221 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.76■□□□□ 0.91
NFKBIEO00221 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.76■□□□□ 0.91
NFKBIEO00221 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.76■□□□□ 0.91
NFKBIEO00221 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKBIEO00221 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NFKBIEO00221 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 AP000997.3-201ENST00000623333 2250 ntBASIC20.76■□□□□ 0.91
NFKBIEO00221 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKBIEO00221 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKBIEO00221 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.75■□□□□ 0.91
NFKBIEO00221 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.75■□□□□ 0.91
NFKBIEO00221 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NFKBIEO00221 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKBIEO00221 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKBIEO00221 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.75■□□□□ 0.91
NFKBIEO00221 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.75■□□□□ 0.91
NFKBIEO00221 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKBIEO00221 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKBIEO00221 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.75■□□□□ 0.91
NFKBIEO00221 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.75■□□□□ 0.91
NFKBIEO00221 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.75■□□□□ 0.91
NFKBIEO00221 AC009477.1-201ENST00000452936 217 ntBASIC20.75■□□□□ 0.91
NFKBIEO00221 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.75■□□□□ 0.91
NFKBIEO00221 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NFKBIEO00221 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NFKBIEO00221 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.75■□□□□ 0.91
NFKBIEO00221 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.75■□□□□ 0.91
NFKBIEO00221 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.75■□□□□ 0.91
NFKBIEO00221 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NFKBIEO00221 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKBIEO00221 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NFKBIEO00221 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKBIEO00221 CROCCP3-202ENST00000420820 1947 ntBASIC20.74■□□□□ 0.91
NFKBIEO00221 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKBIEO00221 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NFKBIEO00221 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NFKBIEO00221 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NFKBIEO00221 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms