Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX39AO00148 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX39AO00148 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX39AO00148 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX39AO00148 LYSMD4-203ENST00000378904 2122 ntBASIC19.59■□□□□ 0.73
DDX39AO00148 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX39AO00148 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX39AO00148 RNA5SP415-201ENST00000517246 115 ntBASIC19.59■□□□□ 0.73
DDX39AO00148 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.59■□□□□ 0.73
DDX39AO00148 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX39AO00148 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.59■□□□□ 0.73
DDX39AO00148 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.59■□□□□ 0.73
DDX39AO00148 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
DDX39AO00148 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX39AO00148 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX39AO00148 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DDX39AO00148 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX39AO00148 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
DDX39AO00148 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX39AO00148 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX39AO00148 AC068880.1-201ENST00000507289 2297 ntBASIC19.59■□□□□ 0.73
DDX39AO00148 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.59■□□□□ 0.73
DDX39AO00148 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX39AO00148 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.58■□□□□ 0.73
DDX39AO00148 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.58■□□□□ 0.73
DDX39AO00148 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DDX39AO00148 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.58■□□□□ 0.73
DDX39AO00148 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX39AO00148 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.58■□□□□ 0.73
DDX39AO00148 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
DDX39AO00148 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
DDX39AO00148 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DDX39AO00148 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
DDX39AO00148 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.58■□□□□ 0.73
DDX39AO00148 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX39AO00148 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DDX39AO00148 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX39AO00148 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
DDX39AO00148 AC073621.1-201ENST00000392730 636 ntBASIC19.58■□□□□ 0.72
DDX39AO00148 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX39AO00148 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX39AO00148 KRT18P27-201ENST00000427733 1299 ntBASIC19.58■□□□□ 0.72
DDX39AO00148 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX39AO00148 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX39AO00148 AC106730.1-201ENST00000566722 1090 ntBASIC19.58■□□□□ 0.72
DDX39AO00148 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX39AO00148 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX39AO00148 MIR1199-201ENST00000621445 119 ntBASIC19.58■□□□□ 0.72
DDX39AO00148 AC004706.3-202ENST00000621574 984 ntBASIC19.58■□□□□ 0.72
DDX39AO00148 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX39AO00148 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX39AO00148 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX39AO00148 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
DDX39AO00148 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX39AO00148 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX39AO00148 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX39AO00148 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX39AO00148 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.58■□□□□ 0.72
DDX39AO00148 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX39AO00148 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
DDX39AO00148 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX39AO00148 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX39AO00148 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
DDX39AO00148 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX39AO00148 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX39AO00148 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX39AO00148 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX39AO00148 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX39AO00148 LINC00982-205ENST00000420957 435 ntBASIC19.57■□□□□ 0.72
DDX39AO00148 UNC93B6-202ENST00000528242 690 ntBASIC19.57■□□□□ 0.72
DDX39AO00148 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX39AO00148 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX39AO00148 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
DDX39AO00148 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX39AO00148 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX39AO00148 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX39AO00148 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX39AO00148 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX39AO00148 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
DDX39AO00148 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX39AO00148 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
DDX39AO00148 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX39AO00148 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 AL135999.2-201ENST00000622438 1686 ntBASIC19.56■□□□□ 0.72
DDX39AO00148 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX39AO00148 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 MIR574-201ENST00000385209 96 ntBASIC19.56■□□□□ 0.72
DDX39AO00148 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX39AO00148 POLD2P1-201ENST00000511220 997 ntBASIC19.56■□□□□ 0.72
DDX39AO00148 AC136632.2-201ENST00000512891 861 ntBASIC19.56■□□□□ 0.72
DDX39AO00148 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX39AO00148 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms