Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.52■□□□□ 0.56
RCCD1A6NED2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.52■□□□□ 0.56
RCCD1A6NED2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.52■□□□□ 0.56
RCCD1A6NED2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.52■□□□□ 0.56
RCCD1A6NED2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RCCD1A6NED2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RCCD1A6NED2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RCCD1A6NED2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.52■□□□□ 0.56
RCCD1A6NED2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RCCD1A6NED2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RCCD1A6NED2 AC117947.1-201ENST00000427448 529 ntBASIC18.52■□□□□ 0.56
RCCD1A6NED2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RCCD1A6NED2 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.52■□□□□ 0.56
RCCD1A6NED2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RCCD1A6NED2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
RCCD1A6NED2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RCCD1A6NED2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RCCD1A6NED2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.52■□□□□ 0.55
RCCD1A6NED2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RCCD1A6NED2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 SPDYE13P-201ENST00000445314 798 ntBASIC18.51■□□□□ 0.55
RCCD1A6NED2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCCD1A6NED2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.51■□□□□ 0.55
RCCD1A6NED2 AL049757.1-201ENST00000616842 1596 ntBASIC18.51■□□□□ 0.55
RCCD1A6NED2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RCCD1A6NED2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RCCD1A6NED2 AC073508.3-201ENST00000619697 1419 ntBASIC18.5■□□□□ 0.55
RCCD1A6NED2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RCCD1A6NED2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCCD1A6NED2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.5■□□□□ 0.55
RCCD1A6NED2 Z83836.1-201ENST00000624605 1642 ntBASIC18.5■□□□□ 0.55
RCCD1A6NED2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.5■□□□□ 0.55
RCCD1A6NED2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RCCD1A6NED2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCCD1A6NED2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCCD1A6NED2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCCD1A6NED2 AC124947.2-201ENST00000547118 1133 ntBASIC18.5■□□□□ 0.55
RCCD1A6NED2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCCD1A6NED2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.5■□□□□ 0.55
RCCD1A6NED2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RCCD1A6NED2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RCCD1A6NED2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RCCD1A6NED2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RCCD1A6NED2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 AC026691.1-201ENST00000602502 2017 ntBASIC18.49■□□□□ 0.55
RCCD1A6NED2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 LIN28AP1-201ENST00000429574 405 ntBASIC18.49■□□□□ 0.55
RCCD1A6NED2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.49■□□□□ 0.55
RCCD1A6NED2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms