Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 DDX43P3-201ENST00000441064 443 ntBASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 REXO1L10P-201ENST00000615707 1290 ntBASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 REXO1L12P-201ENST00000622156 912 ntBASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 FLJ16779-201ENST00000612722 7638 ntBASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 AC016396.2-201ENST00000562575 1417 ntBASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 PCDHB17P-201ENST00000539533 2393 ntBASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 AL353719.1-201ENST00000566847 864 ntBASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 AL023803.3-201ENST00000615559 522 ntBASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 AC092053.1-201ENST00000605787 1936 ntBASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 AL596257.1-201ENST00000641463 2694 ntBASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MEIS3P1A6NDR6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MEIS3P1A6NDR6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms